Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale.
Requirement: GNU gcc8.2 or higher. Please change the name (CXX) of the compiler in the Makefile.
Compiling the source code
The following command makes the required directories:
make bin
The following command makes the binary that is located under the ``bin'' directory:
make
To find the binary:
cd ../bin
Please cite the following paper:
Girgis, H.Z. (2015) Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale. BMC Bioinformatics, 16, 227.