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jarochijarochi
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update #4
1 parent 785e3fe commit 8da80b3

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+693
-381
lines changed

β€ŽR/bg_df.R

+7-10
Original file line numberDiff line numberDiff line change
@@ -6,16 +6,13 @@ library(googlesheets4)
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link <- "https://docs.google.com/spreadsheets/d/1UXBQs_tu0cRYN3XDEPsq3MxlUNvryPEnR-ClSp2uipo/edit?usp=sharing"
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con <- googlesheets4::read_sheet(link,
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sheet = "conferences") %>% mutate(activity = "conferences")
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edu <- googlesheets4::read_sheet(link,
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sheet = "edu") %>% mutate(activity = "education")
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int <- googlesheets4::read_sheet(link,
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sheet = "internships") %>% mutate(activity = "research stays")
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emp <- googlesheets4::read_sheet(link,
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sheet = "work") %>% mutate(activity = "employment")
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team <- googlesheets4::read_sheet(link,
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sheet = "team")
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bio_df <- googlesheets4::read_sheet(link, sheet = "basic_info")
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con <- googlesheets4::read_sheet(link, sheet = "conferences") %>% mutate(activity = "conferences")
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edu <- googlesheets4::read_sheet(link, sheet = "edu") %>% mutate(activity = "education")
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int <- googlesheets4::read_sheet(link, sheet = "internships") %>% mutate(activity = "research stays")
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emp <- googlesheets4::read_sheet(link, sheet = "work") %>% mutate(activity = "employment")
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team <- googlesheets4::read_sheet(link, sheet = "team")
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other_act_df <- googlesheets4::read_sheet(link, sheet = "other_activities")
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full_df <- full_join(con, edu, by = c("start_date", "end_date", "city", "country", "name", "who", "activity")) %>%
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full_join(., int, by = c("start_date", "end_date", "city", "country", "name", "who", "activity")) %>%

β€ŽR/create_ppl_page.R

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@@ -0,0 +1,171 @@
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# whois_full_name <- "MichaΕ‚"
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# whois <- whois
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# whois <- "Jarek"
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source('R/bg_df.R')
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source('R/resume_fun.R')
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create_ppl_page <- function(whois_full_name, whois, file_name){
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qmd_header <- paste0(
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"---
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title: '", whois_full_name, "'\n",
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"sidebar: false
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format:
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html:
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grid:
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sidebar-width: 0px
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body-width: 1500px
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margin-width: 300px
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gutter-width: 1.5rem
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knitr:
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opts_chunk:
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out.width: '95%'
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---
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```{r, echo=FALSE, message=FALSE,include=FALSE}
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source('../../R/bg_df.R')
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whois <- '", whois, "'\n\n",
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"source('../../R/resume_fun.R')
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openalex_id <- basic_info(whois)$openalex_id
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library(fontawesome)
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```
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\n\n")
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bio_txt <- if_else(basic_info(whois)$bio %>% is.na(), paste0("<!-- # πŸ“ **Bio** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- `r stringr::str_flatten(basic_info(whois)$bio)` -->", "\n")
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, "# πŸ“ **Bio**
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------------------------------------------------------------------------
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`r stringr::str_flatten(basic_info(whois)$bio)`
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\n")
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contact_txt <- if_else((bio_df %>% filter(who == whois) %>% .[3:8] %>% janitor::remove_empty() %>% ncol()) != 0,
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paste0(
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"# πŸ“± **Contact**
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------------------------------------------------------------------------
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", stringr::str_flatten(contact_info(whois)$new_col), "\n"),
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paste0("<!-- # πŸ“± **Contact** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- stringr::str_flatten(contact_info(whois)$new_col) -->", "\n")
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)
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research_txt <- if_else((full_df %>% filter(who == whois & cat == "research stays") %>% nrow()) != 0, paste0(
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"# πŸš€ **Research stays**
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------------------------------------------------------------------------
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```{r, echo=FALSE, message=FALSE}
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research_stay(whois)
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```", "\n"), paste0(
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"<!-- # πŸš€ **Research stays** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- research_stay(whois) -->
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<!-- ``` -->", "\n"))
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employment_txt <- if_else((full_df %>% filter(who == whois & cat == "employment") %>% nrow()) != 0, paste0(
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"# πŸ’»πŸ§« **Experience**
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------------------------------------------------------------------------
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```{r, echo=FALSE, message=FALSE}
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work(whois)
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```
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\n"), paste0(
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"<!-- # πŸ’»πŸ§« **Experience** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- work(whois) -->
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<!-- ``` -->", "\n"
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))
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education_txt <- if_else((full_df %>% filter(who == whois & cat == "education") %>% nrow()) != 0, paste0(
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"# πŸŽ“ **Education**
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------------------------------------------------------------------------
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`r stringr::str_flatten(education(whois)$new_col)`
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\n"),
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paste0(
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"<!-- # πŸŽ“ **Education** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- `r stringr::str_flatten(education(whois)$new_col)` -->", "\n"
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))
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conference_txt <- if_else((full_df %>% filter(who == whois & cat == "conferences") %>% nrow()) != 0, paste0(
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"# πŸ‘πŸ» **Conferences, workshops** 🀝🏻
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------------------------------------------------------------------------
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```{r, echo=FALSE, message=FALSE}
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conf_work(whois)
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```
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\n"),
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paste0(
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"<!-- # πŸ‘πŸ» **Conferences, workshops** 🀝🏻 -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- conf_work(whois) -->
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<!-- ``` -->", "\n"))
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publication_txt <- if_else((openalexR::oa_fetch(entity ="works", author.id = basic_info(whois)$openalex_id) %>% nrow()) != 0, paste0(
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"# πŸ“– **Publications**
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------------------------------------------------------------------------
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```{r, echo=FALSE, message=FALSE}
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pubs(whois, openalex_id)
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```
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\n"),
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paste0(
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"<!-- # πŸ“– **Publications** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- pubs(whois, openalex_id) -->
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<!-- ``` -->", "\n"))
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other_act_txt <- if_else((other_act(whois) %>% filter(who == whois) %>% nrow()) != 0, paste0(
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"# πŸ§‘πŸ»β€πŸ”¬ **Other activities**
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------------------------------------------------------------------------
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`r stringr::str_flatten(other_act(whois)$new_col)`
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\n"),
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paste0("<!-- # πŸ§‘πŸ»β€πŸ”¬ **Other activities** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- `r stringr::str_flatten(other_act(whois)$new_col)` -->", "\n"))
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write_lines(c(qmd_header, bio_txt, contact_txt, research_txt, employment_txt, education_txt, conference_txt, publication_txt, other_act_txt),
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file = paste0(file_name, ".qmd"))
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}

β€ŽR/resume_fun.R

+24
Original file line numberDiff line numberDiff line change
@@ -72,3 +72,27 @@ pubs <- function(whois, openalex_id){
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}
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other_act <- function(whois){
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temp_df <- other_act_df %>%
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filter(who == whois) %>%
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mutate(new_col = paste0("* ", activity, "\n"
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))
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}
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basic_info <- function(whois){
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temp_df <- bio_df %>%
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filter(who == whois)
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}
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contact_info <- function(whois){
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basic_info(whois) %>%
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mutate(new_col = paste0(
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if_else(email1 %>% is.na(), "", paste0("[`r fontawesome::fa('envelope', prefer_type = 'regular', fill = 'pink', height = '3em')`](mailto:", email1, ")\n")),
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if_else(email2 %>% is.na(), "", paste0("[`r fontawesome::fa('envelope', prefer_type = 'regular', fill = 'grey', height = '3em')`](mailto:", email2, ")\n")),
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if_else(github %>% is.na(), "", paste0("[`r fontawesome::fa('github', fill = '#24292e', height = '3em')`](https://github.com/", github, ")\n")),
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if_else(orcid %>% is.na(), "", paste0("[`r fontawesome::fa('orcid', fill = '#A6CE39', height = '3em')`](https://orcid.org/", orcid, ")\n")),
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if_else(fb %>% is.na(), "", paste0("[`r fontawesome::fa('facebook', fill = '#304f85', height = '3em')`](https://www.facebook.com/", fb, ")\n")),
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if_else(linkedin %>% is.na(), "", paste0("[`r fontawesome::fa('linkedin', fill = '#0077b5', height = '3em')`](https://www.linkedin.com/in/", linkedin, "/)\n")),
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if_else(X %>% is.na(), "", paste0("[`r fontawesome::fa('x-twitter', fill = '#24292e', height = '3em')`](https://x.com/", X, ")\n"))
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))
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}

β€Žsubsite/team/_temp.qmd renamed to β€Žsubsite/_temp.qmd

+8
Original file line numberDiff line numberDiff line change
@@ -105,3 +105,11 @@ conf_work(whois)
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------------------------------------------------------------------------
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```{r, echo=FALSE, message=FALSE}
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act_df <- other_act(whois)
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```
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`r stringr::str_flatten(act_df$new_col)`
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β€Žsubsite/colab.qmd

+3-3
Original file line numberDiff line numberDiff line change
@@ -4,11 +4,11 @@ title: "BioGenies collaborators"
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### ![](fig/logo/UAB_logo.png){width="10%"} Autonomous University of Barcelona
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::: {layout-ncol=5}
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[![Eva Arribas](fig/ppl/ea.png "Eva Arribas"){}]()
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[![Eva Arribas](fig/ppl/ea.png "Eva Arribas"){}](colab/ear.html)
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[![Oriol BΓ‘rcenas](fig/ppl/ob.png "Oriol BΓ‘rcenas"){}]()
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[![Oriol BΓ‘rcenas](fig/ppl/ob.png "Oriol BΓ‘rcenas"){}](colab/ob.html)
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[![Carlos Pintado-Grima](fig/ppl/cp.png "Carlos Pintado-Grima"){}]()
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[![Carlos Pintado-Grima](fig/ppl/cp.png "Carlos Pintado-Grima"){}](colab/cpg.html)
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:::
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### ![](fig/logo/QI_logo.png){width="10%"} Quadram Institute

β€Žsubsite/colab/cpg.qmd

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---
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title: 'Carlos Pintado-Grima'
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sidebar: false
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format:
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html:
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grid:
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sidebar-width: 0px
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body-width: 1500px
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margin-width: 300px
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gutter-width: 1.5rem
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knitr:
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opts_chunk:
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out.width: '95%'
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---
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```{r, echo=FALSE, message=FALSE,include=FALSE}
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source('../../R/bg_df.R')
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whois <- 'Carlos'
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source('../../R/resume_fun.R')
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openalex_id <- basic_info(whois)$openalex_id
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library(fontawesome)
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```
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<!-- # πŸ“ **Bio** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- `r stringr::str_flatten(basic_info(whois)$bio)` -->
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# πŸ“± **Contact**
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------------------------------------------------------------------------
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[`r fontawesome::fa('envelope', prefer_type = 'regular', fill = 'pink', height = '3em')`](mailto:[email protected])
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[`r fontawesome::fa('orcid', fill = '#A6CE39', height = '3em')`](https://orcid.org/0000-0002-8544-959X)
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<!-- # πŸš€ **Research stays** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- research_stay(whois) -->
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<!-- ``` -->
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<!-- # πŸ’»πŸ§« **Experience** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- work(whois) -->
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<!-- ``` -->
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<!-- # πŸŽ“ **Education** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- `r stringr::str_flatten(education(whois)$new_col)` -->
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<!-- # πŸ‘πŸ» **Conferences, workshops** 🀝🏻 -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- ```{r, echo=FALSE, message=FALSE} -->
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<!-- conf_work(whois) -->
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<!-- ``` -->
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# πŸ“– **Publications**
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------------------------------------------------------------------------
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```{r, echo=FALSE, message=FALSE}
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pubs(whois, openalex_id)
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```
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<!-- # πŸ§‘πŸ»β€πŸ”¬ **Other activities** -->
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<!-- ------------------------------------------------------------------------ -->
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<!-- `r stringr::str_flatten(other_act(whois)$new_col)` -->
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