From 197bbd47c71f36fbb2163419165acc2f4c70e5ac Mon Sep 17 00:00:00 2001 From: Rijul <116858775+Errornautical@users.noreply.github.com> Date: Thu, 5 Sep 2024 00:26:30 +0530 Subject: [PATCH] Delete Paddlehelix/1.0.1a directory --- Paddlehelix/1.0.1a/Dockerfile | 45 ----------------------------------- 1 file changed, 45 deletions(-) delete mode 100644 Paddlehelix/1.0.1a/Dockerfile diff --git a/Paddlehelix/1.0.1a/Dockerfile b/Paddlehelix/1.0.1a/Dockerfile deleted file mode 100644 index 809b0046..00000000 --- a/Paddlehelix/1.0.1a/Dockerfile +++ /dev/null @@ -1,45 +0,0 @@ -# Use an official Miniconda image as the base -FROM continuumio/miniconda3 - -# Set working directory in the container -WORKDIR /app - -# Labels -LABEL base_image="continuumio/miniconda3" -LABEL version="1" -LABEL software="PaddleHelix" -LABEL software.version="1.0.1" -LABEL about.summary="A machine-learning-based bio-computing framework" -LABEL about.home="https://github.com/PaddlePaddle/PaddleHelix" -LABEL about.documentation="https://paddlehelix.readthedocs.io/en/dev/" -LABEL about.license_file="https://github.com/PaddlePaddle/PaddleHelix/blob/dev/LICENSE" -LABEL about.license="Apache-2.0" -LABEL extra.identifiers.biotools="paddlehelix" -LABEL about.tags="Bioinformatics" - -# Create a new conda environment with Python 3.7 -RUN conda create -n paddlehelix python=3.7 -y - -# Use the conda environment -SHELL ["conda", "run", "-n", "paddlehelix", "/bin/bash", "-c"] - -# Install rdkit -RUN conda install -c conda-forge rdkit -y - -# Install paddlepaddle (GPU version) -RUN pip install paddlepaddle-GPU==2.1.0 - -# Install scikit-learn and other potential dependencies -RUN pip install scikit-learn numpy pandas - -# Install pgl -RUN pip install pgl - -# Set environment variable to allow deprecated sklearn package -ENV SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL=True - -# Install PaddleHelix -RUN pip install paddlehelix==1.0.1 - -# Default command to run -CMD ["python"]