diff --git a/Output/RDF_Kin_Data_2022-Dec.ttl b/Output/RDF_Kin_Data_2022-Dec.ttl index 834abd0..75747ae 100644 --- a/Output/RDF_Kin_Data_2022-Dec.ttl +++ b/Output/RDF_Kin_Data_2022-Dec.ttl @@ -3337,149 +3337,149 @@ RHEA:14167 rdf:type wp:Interaction ; rh:accession RHEA:14167. -RHEA:RHEA:47421 - wp:bdbRhea RHEA:RHEA:47421 ; +RHEA:47421 + wp:bdbRhea RHEA:47421 ; sio:SIO_000028 SER:3_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47421. + rh:accession RHEA:47421. -RHEA:RHEA:47422 - wp:bdbRhea RHEA:RHEA:47422 ; +RHEA:47422 + wp:bdbRhea RHEA:47422 ; sio:SIO_000028 SER:4_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47422. + rh:accession RHEA:47422. -RHEA:RHEA:47423 - wp:bdbRhea RHEA:RHEA:47423 ; +RHEA:47423 + wp:bdbRhea RHEA:47423 ; sio:SIO_000028 SER:5_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47423. + rh:accession RHEA:47423. -RHEA:RHEA:47424 - wp:bdbRhea RHEA:RHEA:47424 ; +RHEA:47424 + wp:bdbRhea RHEA:47424 ; sio:SIO_000028 SER:6_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47424. + rh:accession RHEA:47424. -RHEA:RHEA:47425 - wp:bdbRhea RHEA:RHEA:47425 ; +RHEA:47425 + wp:bdbRhea RHEA:47425 ; sio:SIO_000028 SER:7_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47425. + rh:accession RHEA:47425. -RHEA:RHEA:47426 - wp:bdbRhea RHEA:RHEA:47426 ; +RHEA:47426 + wp:bdbRhea RHEA:47426 ; sio:SIO_000028 SER:8_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47426. + rh:accession RHEA:47426. -RHEA:RHEA:47427 - wp:bdbRhea RHEA:RHEA:47427 ; +RHEA:47427 + wp:bdbRhea RHEA:47427 ; sio:SIO_000028 SER:9_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47427. + rh:accession RHEA:47427. -RHEA:RHEA:47428 - wp:bdbRhea RHEA:RHEA:47428 ; +RHEA:47428 + wp:bdbRhea RHEA:47428 ; sio:SIO_000028 SER:10_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47428. + rh:accession RHEA:47428. -RHEA:RHEA:47429 - wp:bdbRhea RHEA:RHEA:47429 ; +RHEA:47429 + wp:bdbRhea RHEA:47429 ; sio:SIO_000028 SER:11_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:47429. + rh:accession RHEA:47429. -RHEA:RHEA:21253 - wp:bdbRhea RHEA:RHEA:21253 ; +RHEA:21253 + wp:bdbRhea RHEA:21253 ; sio:SIO_000028 SER:12_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:21253. + rh:accession RHEA:21253. -RHEA:RHEA:21254 - wp:bdbRhea RHEA:RHEA:21254 ; +RHEA:21254 + wp:bdbRhea RHEA:21254 ; sio:SIO_000028 SER:13_reaction ; sio:SIO_000028 SER:29_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:21254. + rh:accession RHEA:21254. -RHEA:RHEA:21255 - wp:bdbRhea RHEA:RHEA:21255 ; +RHEA:21255 + wp:bdbRhea RHEA:21255 ; sio:SIO_000028 SER:14_reaction ; sio:SIO_000028 SER:30_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:21255. + rh:accession RHEA:21255. -RHEA:RHEA:49614 - wp:bdbRhea RHEA:RHEA:49614 ; +RHEA:49614 + wp:bdbRhea RHEA:49614 ; sio:SIO_000028 SER:15_reaction ; sio:SIO_000028 SER:24_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49614. + rh:accession RHEA:49614. -RHEA:RHEA:49615 - wp:bdbRhea RHEA:RHEA:49615 ; +RHEA:49615 + wp:bdbRhea RHEA:49615 ; sio:SIO_000028 SER:16_reaction ; sio:SIO_000028 SER:25_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49615. + rh:accession RHEA:49615. -RHEA:RHEA:49616 - wp:bdbRhea RHEA:RHEA:49616 ; +RHEA:49616 + wp:bdbRhea RHEA:49616 ; sio:SIO_000028 SER:17_reaction ; sio:SIO_000028 SER:26_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49616. + rh:accession RHEA:49616. -RHEA:RHEA:49617 - wp:bdbRhea RHEA:RHEA:49617 ; +RHEA:49617 + wp:bdbRhea RHEA:49617 ; sio:SIO_000028 SER:18_reaction ; sio:SIO_000028 SER:27_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49617. + rh:accession RHEA:49617. -RHEA:RHEA:49618 - wp:bdbRhea RHEA:RHEA:49618 ; +RHEA:49618 + wp:bdbRhea RHEA:49618 ; sio:SIO_000028 SER:19_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49618. + rh:accession RHEA:49618. -RHEA:RHEA:49619 - wp:bdbRhea RHEA:RHEA:49619 ; +RHEA:49619 + wp:bdbRhea RHEA:49619 ; sio:SIO_000028 SER:20_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49619. + rh:accession RHEA:49619. -RHEA:RHEA:49620 - wp:bdbRhea RHEA:RHEA:49620 ; +RHEA:49620 + wp:bdbRhea RHEA:49620 ; sio:SIO_000028 SER:21_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49620. + rh:accession RHEA:49620. -RHEA:RHEA:49621 - wp:bdbRhea RHEA:RHEA:49621 ; +RHEA:49621 + wp:bdbRhea RHEA:49621 ; sio:SIO_000028 SER:22_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:49621. + rh:accession RHEA:49621. -RHEA:RHEA:21256 - wp:bdbRhea RHEA:RHEA:21256 ; +RHEA:21256 + wp:bdbRhea RHEA:21256 ; sio:SIO_000028 SER:31_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:21256. + rh:accession RHEA:21256. -RHEA:RHEA:23905 - wp:bdbRhea RHEA:RHEA:23905 ; +RHEA:23905 + wp:bdbRhea RHEA:23905 ; sio:SIO_000028 SER:32_reaction ; sio:SIO_000028 SER:33_reaction ; sio:SIO_000028 SER:34_reaction ; sio:SIO_000028 SER:35_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:23905. + rh:accession RHEA:23905. -RHEA:RHEA:10349 - wp:bdbRhea RHEA:RHEA:10349 ; +RHEA:10349 + wp:bdbRhea RHEA:10349 ; sio:SIO_000028 SER:37_reaction ; sio:SIO_000028 SER:38_reaction ; sio:SIO_000028 SER:39_reaction ; @@ -3491,17 +3491,17 @@ RHEA:RHEA:10349 sio:SIO_000028 SER:45_reaction ; sio:SIO_000028 SER:46_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:10349. + rh:accession RHEA:10349. -RHEA:RHEA:13286 - wp:bdbRhea RHEA:RHEA:13286 ; +RHEA:13286 + wp:bdbRhea RHEA:13286 ; sio:SIO_000028 SER:47_reaction ; sio:SIO_000028 SER:48_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:13286. + rh:accession RHEA:13286. -RHEA:RHEA:13558 - wp:bdbRhea RHEA:RHEA:13558 ; +RHEA:13558 + wp:bdbRhea RHEA:13558 ; sio:SIO_000028 SER:49_reaction ; sio:SIO_000028 SER:50_reaction ; sio:SIO_000028 SER:51_reaction ; @@ -3534,41 +3534,41 @@ RHEA:RHEA:13558 sio:SIO_000028 SER:78_reaction ; sio:SIO_000028 SER:79_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:13558. + rh:accession RHEA:13558. -RHEA:RHEA:12922 - wp:bdbRhea RHEA:RHEA:12922 ; +RHEA:12922 + wp:bdbRhea RHEA:12922 ; sio:SIO_000028 SER:81_reaction ; sio:SIO_000028 SER:82_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:12922. + rh:accession RHEA:12922. -RHEA:RHEA:24065 - wp:bdbRhea RHEA:RHEA:24065 ; +RHEA:24065 + wp:bdbRhea RHEA:24065 ; sio:SIO_000028 SER:83_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24065. + rh:accession RHEA:24065. -RHEA:RHEA:13186 - wp:bdbRhea RHEA:RHEA:13186 ; +RHEA:13186 + wp:bdbRhea RHEA:13186 ; sio:SIO_000028 SER:84_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:13186. + rh:accession RHEA:13186. -RHEA:RHEA:18966 - wp:bdbRhea RHEA:RHEA:18966 ; +RHEA:18966 + wp:bdbRhea RHEA:18966 ; sio:SIO_000028 SER:85_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:18966. + rh:accession RHEA:18966. -RHEA:RHEA:19866 - wp:bdbRhea RHEA:RHEA:19866 ; +RHEA:19866 + wp:bdbRhea RHEA:19866 ; sio:SIO_000028 SER:86_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:19866. + rh:accession RHEA:19866. -RHEA:RHEA:31240 - wp:bdbRhea RHEA:RHEA:31240 ; +RHEA:31240 + wp:bdbRhea RHEA:31240 ; sio:SIO_000028 SER:87_reaction ; sio:SIO_000028 SER:88_reaction ; sio:SIO_000028 SER:89_reaction ; @@ -3579,25 +3579,25 @@ RHEA:RHEA:31240 sio:SIO_000028 SER:94_reaction ; sio:SIO_000028 SER:95_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:31240. + rh:accession RHEA:31240. -RHEA:RHEA:18258 - wp:bdbRhea RHEA:RHEA:18258 ; +RHEA:18258 + wp:bdbRhea RHEA:18258 ; sio:SIO_000028 SER:96_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:18258. + rh:accession RHEA:18258. -RHEA:RHEA:25577 - wp:bdbRhea RHEA:RHEA:25577 ; +RHEA:25577 + wp:bdbRhea RHEA:25577 ; sio:SIO_000028 SER:97_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:25577. + rh:accession RHEA:25577. -RHEA:RHEA:22586 - wp:bdbRhea RHEA:RHEA:22586 ; +RHEA:22586 + wp:bdbRhea RHEA:22586 ; sio:SIO_000028 SER:98_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:22586. + rh:accession RHEA:22586. RHEA:21296 wp:bdbRhea RHEA:21296 ; @@ -3670,54 +3670,54 @@ RHEA:18550 rdf:type wp:Interaction ; rh:accession RHEA:18550. -RHEA:RHEA:34281 - wp:bdbRhea RHEA:RHEA:34281 ; +RHEA:34281 + wp:bdbRhea RHEA:34281 ; sio:SIO_000028 SER:136_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:34281. + rh:accession RHEA:34281. -RHEA:RHEA:13134 - wp:bdbRhea RHEA:RHEA:13134 ; +RHEA:13134 + wp:bdbRhea RHEA:13134 ; sio:SIO_000028 SER:137_reaction ; sio:SIO_000028 SER:138_reaction ; sio:SIO_000028 SER:139_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:13134. + rh:accession RHEA:13134. -RHEA:RHEA:13290 - wp:bdbRhea RHEA:RHEA:13290 ; +RHEA:13290 + wp:bdbRhea RHEA:13290 ; sio:SIO_000028 SER:140_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:13290. + rh:accession RHEA:13290. -RHEA:RHEA:23381 - wp:bdbRhea RHEA:RHEA:23381 ; +RHEA:23381 + wp:bdbRhea RHEA:23381 ; sio:SIO_000028 SER:141_reaction ; sio:SIO_000028 SER:142_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:23381. + rh:accession RHEA:23381. -RHEA:RHEA:13866 - wp:bdbRhea RHEA:RHEA:13866 ; +RHEA:13866 + wp:bdbRhea RHEA:13866 ; sio:SIO_000028 SER:143_reaction ; sio:SIO_000028 SER:144_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:13866. + rh:accession RHEA:13866. -RHEA:RHEA:29516 - wp:bdbRhea RHEA:RHEA:29516 ; +RHEA:29516 + wp:bdbRhea RHEA:29516 ; sio:SIO_000028 SER:145_reaction ; sio:SIO_000028 SER:146_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:29516. + rh:accession RHEA:29516. -RHEA:RHEA:29523 - wp:bdbRhea RHEA:RHEA:29523 ; +RHEA:29523 + wp:bdbRhea RHEA:29523 ; sio:SIO_000028 SER:147_reaction ; sio:SIO_000028 SER:148_reaction ; sio:SIO_000028 SER:149_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:29523. + rh:accession RHEA:29523. RHEA:46752 wp:bdbRhea RHEA:46752 ; @@ -3884,482 +3884,482 @@ RHEA:10245 rdf:type wp:Interaction ; rh:accession RHEA:10245. -RHEA:RHEA:35740 - wp:bdbRhea RHEA:RHEA:35740 ; +RHEA:35740 + wp:bdbRhea RHEA:35740 ; sio:SIO_000028 SER:266_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35740. + rh:accession RHEA:35740. -RHEA:RHEA:35741 - wp:bdbRhea RHEA:RHEA:35741 ; +RHEA:35741 + wp:bdbRhea RHEA:35741 ; sio:SIO_000028 SER:267_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35741. + rh:accession RHEA:35741. -RHEA:RHEA:35742 - wp:bdbRhea RHEA:RHEA:35742 ; +RHEA:35742 + wp:bdbRhea RHEA:35742 ; sio:SIO_000028 SER:268_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35742. + rh:accession RHEA:35742. -RHEA:RHEA:35743 - wp:bdbRhea RHEA:RHEA:35743 ; +RHEA:35743 + wp:bdbRhea RHEA:35743 ; sio:SIO_000028 SER:269_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35743. + rh:accession RHEA:35743. -RHEA:RHEA:35744 - wp:bdbRhea RHEA:RHEA:35744 ; +RHEA:35744 + wp:bdbRhea RHEA:35744 ; sio:SIO_000028 SER:270_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35744. + rh:accession RHEA:35744. -RHEA:RHEA:35745 - wp:bdbRhea RHEA:RHEA:35745 ; +RHEA:35745 + wp:bdbRhea RHEA:35745 ; sio:SIO_000028 SER:271_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35745. + rh:accession RHEA:35745. -RHEA:RHEA:35746 - wp:bdbRhea RHEA:RHEA:35746 ; +RHEA:35746 + wp:bdbRhea RHEA:35746 ; sio:SIO_000028 SER:272_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35746. + rh:accession RHEA:35746. -RHEA:RHEA:35747 - wp:bdbRhea RHEA:RHEA:35747 ; +RHEA:35747 + wp:bdbRhea RHEA:35747 ; sio:SIO_000028 SER:273_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35747. + rh:accession RHEA:35747. -RHEA:RHEA:35748 - wp:bdbRhea RHEA:RHEA:35748 ; +RHEA:35748 + wp:bdbRhea RHEA:35748 ; sio:SIO_000028 SER:274_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35748. + rh:accession RHEA:35748. -RHEA:RHEA:35749 - wp:bdbRhea RHEA:RHEA:35749 ; +RHEA:35749 + wp:bdbRhea RHEA:35749 ; sio:SIO_000028 SER:275_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35749. + rh:accession RHEA:35749. -RHEA:RHEA:35750 - wp:bdbRhea RHEA:RHEA:35750 ; +RHEA:35750 + wp:bdbRhea RHEA:35750 ; sio:SIO_000028 SER:276_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35750. + rh:accession RHEA:35750. -RHEA:RHEA:35751 - wp:bdbRhea RHEA:RHEA:35751 ; +RHEA:35751 + wp:bdbRhea RHEA:35751 ; sio:SIO_000028 SER:277_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35751. + rh:accession RHEA:35751. -RHEA:RHEA:35752 - wp:bdbRhea RHEA:RHEA:35752 ; +RHEA:35752 + wp:bdbRhea RHEA:35752 ; sio:SIO_000028 SER:278_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35752. + rh:accession RHEA:35752. -RHEA:RHEA:35753 - wp:bdbRhea RHEA:RHEA:35753 ; +RHEA:35753 + wp:bdbRhea RHEA:35753 ; sio:SIO_000028 SER:279_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:35753. + rh:accession RHEA:35753. -RHEA:RHEA:24077 - wp:bdbRhea RHEA:RHEA:24077 ; +RHEA:24077 + wp:bdbRhea RHEA:24077 ; sio:SIO_000028 SER:281_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24077. + rh:accession RHEA:24077. -RHEA:RHEA:24078 - wp:bdbRhea RHEA:RHEA:24078 ; +RHEA:24078 + wp:bdbRhea RHEA:24078 ; sio:SIO_000028 SER:282_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24078. + rh:accession RHEA:24078. -RHEA:RHEA:24079 - wp:bdbRhea RHEA:RHEA:24079 ; +RHEA:24079 + wp:bdbRhea RHEA:24079 ; sio:SIO_000028 SER:283_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24079. + rh:accession RHEA:24079. -RHEA:RHEA:24080 - wp:bdbRhea RHEA:RHEA:24080 ; +RHEA:24080 + wp:bdbRhea RHEA:24080 ; sio:SIO_000028 SER:284_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24080. + rh:accession RHEA:24080. -RHEA:RHEA:24081 - wp:bdbRhea RHEA:RHEA:24081 ; +RHEA:24081 + wp:bdbRhea RHEA:24081 ; sio:SIO_000028 SER:285_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24081. + rh:accession RHEA:24081. -RHEA:RHEA:24082 - wp:bdbRhea RHEA:RHEA:24082 ; +RHEA:24082 + wp:bdbRhea RHEA:24082 ; sio:SIO_000028 SER:286_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24082. + rh:accession RHEA:24082. -RHEA:RHEA:24083 - wp:bdbRhea RHEA:RHEA:24083 ; +RHEA:24083 + wp:bdbRhea RHEA:24083 ; sio:SIO_000028 SER:287_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24083. + rh:accession RHEA:24083. -RHEA:RHEA:24084 - wp:bdbRhea RHEA:RHEA:24084 ; +RHEA:24084 + wp:bdbRhea RHEA:24084 ; sio:SIO_000028 SER:288_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24084. + rh:accession RHEA:24084. -RHEA:RHEA:24085 - wp:bdbRhea RHEA:RHEA:24085 ; +RHEA:24085 + wp:bdbRhea RHEA:24085 ; sio:SIO_000028 SER:289_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24085. + rh:accession RHEA:24085. -RHEA:RHEA:24086 - wp:bdbRhea RHEA:RHEA:24086 ; +RHEA:24086 + wp:bdbRhea RHEA:24086 ; sio:SIO_000028 SER:290_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24086. + rh:accession RHEA:24086. -RHEA:RHEA:24087 - wp:bdbRhea RHEA:RHEA:24087 ; +RHEA:24087 + wp:bdbRhea RHEA:24087 ; sio:SIO_000028 SER:291_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24087. + rh:accession RHEA:24087. -RHEA:RHEA:24088 - wp:bdbRhea RHEA:RHEA:24088 ; +RHEA:24088 + wp:bdbRhea RHEA:24088 ; sio:SIO_000028 SER:292_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:24088. + rh:accession RHEA:24088. -RHEA:RHEA:50237 - wp:bdbRhea RHEA:RHEA:50237 ; +RHEA:50237 + wp:bdbRhea RHEA:50237 ; sio:SIO_000028 SER:296_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50237. + rh:accession RHEA:50237. -RHEA:RHEA:50238 - wp:bdbRhea RHEA:RHEA:50238 ; +RHEA:50238 + wp:bdbRhea RHEA:50238 ; sio:SIO_000028 SER:297_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50238. + rh:accession RHEA:50238. -RHEA:RHEA:50239 - wp:bdbRhea RHEA:RHEA:50239 ; +RHEA:50239 + wp:bdbRhea RHEA:50239 ; sio:SIO_000028 SER:298_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50239. + rh:accession RHEA:50239. -RHEA:RHEA:50240 - wp:bdbRhea RHEA:RHEA:50240 ; +RHEA:50240 + wp:bdbRhea RHEA:50240 ; sio:SIO_000028 SER:299_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50240. + rh:accession RHEA:50240. -RHEA:RHEA:50241 - wp:bdbRhea RHEA:RHEA:50241 ; +RHEA:50241 + wp:bdbRhea RHEA:50241 ; sio:SIO_000028 SER:300_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50241. + rh:accession RHEA:50241. -RHEA:RHEA:50242 - wp:bdbRhea RHEA:RHEA:50242 ; +RHEA:50242 + wp:bdbRhea RHEA:50242 ; sio:SIO_000028 SER:301_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50242. + rh:accession RHEA:50242. -RHEA:RHEA:50243 - wp:bdbRhea RHEA:RHEA:50243 ; +RHEA:50243 + wp:bdbRhea RHEA:50243 ; sio:SIO_000028 SER:302_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50243. + rh:accession RHEA:50243. -RHEA:RHEA:50244 - wp:bdbRhea RHEA:RHEA:50244 ; +RHEA:50244 + wp:bdbRhea RHEA:50244 ; sio:SIO_000028 SER:303_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50244. + rh:accession RHEA:50244. -RHEA:RHEA:50245 - wp:bdbRhea RHEA:RHEA:50245 ; +RHEA:50245 + wp:bdbRhea RHEA:50245 ; sio:SIO_000028 SER:304_reaction ; sio:SIO_000028 SER:328_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50245. + rh:accession RHEA:50245. -RHEA:RHEA:50246 - wp:bdbRhea RHEA:RHEA:50246 ; +RHEA:50246 + wp:bdbRhea RHEA:50246 ; sio:SIO_000028 SER:305_reaction ; sio:SIO_000028 SER:329_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50246. + rh:accession RHEA:50246. -RHEA:RHEA:46309 - wp:bdbRhea RHEA:RHEA:46309 ; +RHEA:46309 + wp:bdbRhea RHEA:46309 ; sio:SIO_000028 SER:306_reaction ; sio:SIO_000028 SER:324_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46309. + rh:accession RHEA:46309. -RHEA:RHEA:46310 - wp:bdbRhea RHEA:RHEA:46310 ; +RHEA:46310 + wp:bdbRhea RHEA:46310 ; sio:SIO_000028 SER:307_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46310. + rh:accession RHEA:46310. -RHEA:RHEA:46311 - wp:bdbRhea RHEA:RHEA:46311 ; +RHEA:46311 + wp:bdbRhea RHEA:46311 ; sio:SIO_000028 SER:308_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46311. + rh:accession RHEA:46311. -RHEA:RHEA:46312 - wp:bdbRhea RHEA:RHEA:46312 ; +RHEA:46312 + wp:bdbRhea RHEA:46312 ; sio:SIO_000028 SER:309_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46312. + rh:accession RHEA:46312. -RHEA:RHEA:46313 - wp:bdbRhea RHEA:RHEA:46313 ; +RHEA:46313 + wp:bdbRhea RHEA:46313 ; sio:SIO_000028 SER:310_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46313. + rh:accession RHEA:46313. -RHEA:RHEA:46314 - wp:bdbRhea RHEA:RHEA:46314 ; +RHEA:46314 + wp:bdbRhea RHEA:46314 ; sio:SIO_000028 SER:311_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46314. + rh:accession RHEA:46314. -RHEA:RHEA:46315 - wp:bdbRhea RHEA:RHEA:46315 ; +RHEA:46315 + wp:bdbRhea RHEA:46315 ; sio:SIO_000028 SER:312_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46315. + rh:accession RHEA:46315. -RHEA:RHEA:46316 - wp:bdbRhea RHEA:RHEA:46316 ; +RHEA:46316 + wp:bdbRhea RHEA:46316 ; sio:SIO_000028 SER:313_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46316. + rh:accession RHEA:46316. -RHEA:RHEA:46317 - wp:bdbRhea RHEA:RHEA:46317 ; +RHEA:46317 + wp:bdbRhea RHEA:46317 ; sio:SIO_000028 SER:314_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46317. + rh:accession RHEA:46317. -RHEA:RHEA:46318 - wp:bdbRhea RHEA:RHEA:46318 ; +RHEA:46318 + wp:bdbRhea RHEA:46318 ; sio:SIO_000028 SER:315_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46318. + rh:accession RHEA:46318. -RHEA:RHEA:46319 - wp:bdbRhea RHEA:RHEA:46319 ; +RHEA:46319 + wp:bdbRhea RHEA:46319 ; sio:SIO_000028 SER:316_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46319. + rh:accession RHEA:46319. -RHEA:RHEA:46320 - wp:bdbRhea RHEA:RHEA:46320 ; +RHEA:46320 + wp:bdbRhea RHEA:46320 ; sio:SIO_000028 SER:317_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46320. + rh:accession RHEA:46320. -RHEA:RHEA:46321 - wp:bdbRhea RHEA:RHEA:46321 ; +RHEA:46321 + wp:bdbRhea RHEA:46321 ; sio:SIO_000028 SER:318_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46321. + rh:accession RHEA:46321. -RHEA:RHEA:46322 - wp:bdbRhea RHEA:RHEA:46322 ; +RHEA:46322 + wp:bdbRhea RHEA:46322 ; sio:SIO_000028 SER:319_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46322. + rh:accession RHEA:46322. -RHEA:RHEA:46323 - wp:bdbRhea RHEA:RHEA:46323 ; +RHEA:46323 + wp:bdbRhea RHEA:46323 ; sio:SIO_000028 SER:320_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46323. + rh:accession RHEA:46323. -RHEA:RHEA:46324 - wp:bdbRhea RHEA:RHEA:46324 ; +RHEA:46324 + wp:bdbRhea RHEA:46324 ; sio:SIO_000028 SER:321_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46324. + rh:accession RHEA:46324. -RHEA:RHEA:46325 - wp:bdbRhea RHEA:RHEA:46325 ; +RHEA:46325 + wp:bdbRhea RHEA:46325 ; sio:SIO_000028 SER:322_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46325. + rh:accession RHEA:46325. -RHEA:RHEA:46326 - wp:bdbRhea RHEA:RHEA:46326 ; +RHEA:46326 + wp:bdbRhea RHEA:46326 ; sio:SIO_000028 SER:323_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:46326. + rh:accession RHEA:46326. -RHEA:RHEA:14754 - wp:bdbRhea RHEA:RHEA:14754 ; +RHEA:14754 + wp:bdbRhea RHEA:14754 ; sio:SIO_000028 SER:325_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:14754. + rh:accession RHEA:14754. -RHEA:RHEA:14755 - wp:bdbRhea RHEA:RHEA:14755 ; +RHEA:14755 + wp:bdbRhea RHEA:14755 ; sio:SIO_000028 SER:326_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:14755. + rh:accession RHEA:14755. -RHEA:RHEA:14756 - wp:bdbRhea RHEA:RHEA:14756 ; +RHEA:14756 + wp:bdbRhea RHEA:14756 ; sio:SIO_000028 SER:327_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:14756. + rh:accession RHEA:14756. -RHEA:RHEA:50247 - wp:bdbRhea RHEA:RHEA:50247 ; +RHEA:50247 + wp:bdbRhea RHEA:50247 ; sio:SIO_000028 SER:330_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50247. + rh:accession RHEA:50247. -RHEA:RHEA:50248 - wp:bdbRhea RHEA:RHEA:50248 ; +RHEA:50248 + wp:bdbRhea RHEA:50248 ; sio:SIO_000028 SER:331_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:50248. + rh:accession RHEA:50248. -RHEA:RHEA:15630 - wp:bdbRhea RHEA:RHEA:15630 ; +RHEA:15630 + wp:bdbRhea RHEA:15630 ; sio:SIO_000028 SER:343_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:15630. + rh:accession RHEA:15630. -RHEA:RHEA:15631 - wp:bdbRhea RHEA:RHEA:15631 ; +RHEA:15631 + wp:bdbRhea RHEA:15631 ; sio:SIO_000028 SER:344_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:15631. + rh:accession RHEA:15631. -RHEA:RHEA:15842 - wp:bdbRhea RHEA:RHEA:15842 ; +RHEA:15842 + wp:bdbRhea RHEA:15842 ; sio:SIO_000028 SER:345_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:15842. + rh:accession RHEA:15842. -RHEA:RHEA:15843 - wp:bdbRhea RHEA:RHEA:15843 ; +RHEA:15843 + wp:bdbRhea RHEA:15843 ; sio:SIO_000028 SER:346_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:15843. + rh:accession RHEA:15843. -RHEA:RHEA:15844 - wp:bdbRhea RHEA:RHEA:15844 ; +RHEA:15844 + wp:bdbRhea RHEA:15844 ; sio:SIO_000028 SER:347_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:15844. + rh:accession RHEA:15844. -RHEA:RHEA:11390 - wp:bdbRhea RHEA:RHEA:11390 ; +RHEA:11390 + wp:bdbRhea RHEA:11390 ; sio:SIO_000028 SER:348_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11390. + rh:accession RHEA:11390. -RHEA:RHEA:11391 - wp:bdbRhea RHEA:RHEA:11391 ; +RHEA:11391 + wp:bdbRhea RHEA:11391 ; sio:SIO_000028 SER:349_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11391. + rh:accession RHEA:11391. -RHEA:RHEA:11392 - wp:bdbRhea RHEA:RHEA:11392 ; +RHEA:11392 + wp:bdbRhea RHEA:11392 ; sio:SIO_000028 SER:350_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11392. + rh:accession RHEA:11392. -RHEA:RHEA:11393 - wp:bdbRhea RHEA:RHEA:11393 ; +RHEA:11393 + wp:bdbRhea RHEA:11393 ; sio:SIO_000028 SER:351_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11393. + rh:accession RHEA:11393. -RHEA:RHEA:11394 - wp:bdbRhea RHEA:RHEA:11394 ; +RHEA:11394 + wp:bdbRhea RHEA:11394 ; sio:SIO_000028 SER:352_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11394. + rh:accession RHEA:11394. -RHEA:RHEA:11395 - wp:bdbRhea RHEA:RHEA:11395 ; +RHEA:11395 + wp:bdbRhea RHEA:11395 ; sio:SIO_000028 SER:353_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11395. + rh:accession RHEA:11395. -RHEA:RHEA:11396 - wp:bdbRhea RHEA:RHEA:11396 ; +RHEA:11396 + wp:bdbRhea RHEA:11396 ; sio:SIO_000028 SER:354_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11396. + rh:accession RHEA:11396. -RHEA:RHEA:11397 - wp:bdbRhea RHEA:RHEA:11397 ; +RHEA:11397 + wp:bdbRhea RHEA:11397 ; sio:SIO_000028 SER:355_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11397. + rh:accession RHEA:11397. -RHEA:RHEA:11398 - wp:bdbRhea RHEA:RHEA:11398 ; +RHEA:11398 + wp:bdbRhea RHEA:11398 ; sio:SIO_000028 SER:356_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:11398. + rh:accession RHEA:11398. -RHEA:RHEA:53117 - wp:bdbRhea RHEA:RHEA:53117 ; +RHEA:53117 + wp:bdbRhea RHEA:53117 ; sio:SIO_000028 SER:357_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:53117. + rh:accession RHEA:53117. -RHEA:RHEA:53118 - wp:bdbRhea RHEA:RHEA:53118 ; +RHEA:53118 + wp:bdbRhea RHEA:53118 ; sio:SIO_000028 SER:358_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:53118. + rh:accession RHEA:53118. -RHEA:RHEA:53119 - wp:bdbRhea RHEA:RHEA:53119 ; +RHEA:53119 + wp:bdbRhea RHEA:53119 ; sio:SIO_000028 SER:359_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:53119. + rh:accession RHEA:53119. -RHEA:RHEA:54385 - wp:bdbRhea RHEA:RHEA:54385 ; +RHEA:54385 + wp:bdbRhea RHEA:54385 ; sio:SIO_000028 SER:360_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:54385. + rh:accession RHEA:54385. -RHEA:RHEA:54386 - wp:bdbRhea RHEA:RHEA:54386 ; +RHEA:54386 + wp:bdbRhea RHEA:54386 ; sio:SIO_000028 SER:361_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:54386. + rh:accession RHEA:54386. -RHEA:RHEA:54387 - wp:bdbRhea RHEA:RHEA:54387 ; +RHEA:54387 + wp:bdbRhea RHEA:54387 ; sio:SIO_000028 SER:362_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:54387. + rh:accession RHEA:54387. RHEA:24249 wp:bdbRhea RHEA:24249 ; @@ -4400,23 +4400,23 @@ RHEA:25311 rdf:type wp:Interaction ; rh:accession RHEA:25311. -RHEA:RHEA:10994 - wp:bdbRhea RHEA:RHEA:10994 ; +RHEA:10994 + wp:bdbRhea RHEA:10994 ; sio:SIO_000028 SER:375_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:10994. + rh:accession RHEA:10994. -RHEA:RHEA:17907 - wp:bdbRhea RHEA:RHEA:17907 ; +RHEA:17907 + wp:bdbRhea RHEA:17907 ; sio:SIO_000028 SER:376_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:17907. + rh:accession RHEA:17907. -RHEA:RHEA:18169 - wp:bdbRhea RHEA:RHEA:18169 ; +RHEA:18169 + wp:bdbRhea RHEA:18169 ; sio:SIO_000028 SER:377_reaction ; rdf:type wp:Interaction ; - rh:accession RHEA:RHEA:18169. + rh:accession RHEA:18169. RHEA:52512 wp:bdbRhea RHEA:52512 ; diff --git a/createRDFKinData.py b/createRDFKinData.py index 35bfe3f..292f796 100644 --- a/createRDFKinData.py +++ b/createRDFKinData.py @@ -334,11 +334,18 @@ ListErrors.append("CHECK: Data format for Rhea contains Reactome IDs, check original data for: "+ g[0] + ' : ' + g[6] + ' ' + g[18] + '\n') continue elif(result_rhea): ##regex check - ListRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'wp:bdbRhea' + ' RHEA:' + g[6].strip( ) ) - ListRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'sio:SIO_000028' + ' ' + g[0].strip( ) + '_reaction') - ListLinkRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'rdf:type' + ' ' + "wp:Interaction" + ' ;') - ListLinkRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'rh:accession' + ' RHEA:' + g[6].strip( ) + '.' ) - ListRheaID_type.append(g[0].strip( ) + '\t' + 'rdf:type ' + 'wp:InteractionData') ##To make sure statement ends with type + if ( "rhea" in g[6].strip().lower() ) : ##If Rhea is part of the ID structure. + ListRheaID.append( g[6].strip( ) + '\t' + 'wp:bdbRhea' + ' ' + g[6].strip( ) ) + ListRheaID.append( g[6].strip( ) + '\t' + 'sio:SIO_000028' + ' ' + g[0].strip( ) + '_reaction') + ListLinkRheaID.append( g[6].strip( ) + '\t' + 'rdf:type' + ' ' + "wp:Interaction" + ' ;') + ListLinkRheaID.append( g[6].strip( ) + '\t' + 'rh:accession' + ' ' + g[6].strip( ) + '.' ) + ListRheaID_type.append(g[0].strip( ) + '\t' + 'rdf:type ' + 'wp:InteractionData') ##To make sure statement ends with type + else: ##If Rhea is NOT part of the ID structure. + ListRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'wp:bdbRhea' + ' RHEA:' + g[6].strip( ) ) + ListRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'sio:SIO_000028' + ' ' + g[0].strip( ) + '_reaction') + ListLinkRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'rdf:type' + ' ' + "wp:Interaction" + ' ;') + ListLinkRheaID.append('RHEA:' + g[6].strip( ) + '\t' + 'rh:accession' + ' RHEA:' + g[6].strip( ) + '.' ) + ListRheaID_type.append(g[0].strip( ) + '\t' + 'rdf:type ' + 'wp:InteractionData') ##To make sure statement ends with type countRhea = countRhea +1 elif ('+' in g[6])|('=' in g[6]): #if no Rhea is available, but there is a reaction equation. ListRheaID.append(g[0].strip( ) + '\t' + 'rh:equation' + ' "' + g[6].strip( ) + '"^^xsd:string') ##Missing directional info!!