DESCRIPTION

Package: RNAseQC
Title: Helper functions for conducting quality control of RNAseq data
Version: 0.0.0.9009
Authors@R: person("Matthew", "Dufort", email = "matt.dufort@gmail.com", role = c("aut", "cre"))
Description: This package includes functions to assist with quality control of
    RNAseq data. It includes functions for running PCA, plotting PCA output,
    plotting quality metrics, estimating and plotting read saturation, inferring
    the sex of a sample source from X- and Y-chromosome reads, determining and
    plotting correlations between clinical/quality variables and PCs.
biocViews:
Imports:
    reshape2,
    ggplot2,
    dplyr,
    rlang,
    ICC,
    bigtabulate,
    ggthemes,
	checkmate,
    countSubsetNorm,
    miscHelpers,
	biomaRt,
    ComplexHeatmap
Remotes:
	BenaroyaResearch/countSubsetNorm,
	BenaroyaResearch/miscHelpers,
	stephenturner/annotables
Depends:
    R (>= 3.2.2)
Suggests:
    annotables
License: GPL-3
LazyData: true
RoxygenNote: 7.3.2