diff --git a/snakefile.py b/snakefile.py
index 257d41c..3cd1045 100644
--- a/snakefile.py
+++ b/snakefile.py
@@ -25,6 +25,7 @@
 include   : os.path.join(config['locations']['pkglibexecdir'], 'scripts/update_pigx_work.py')
 include   : os.path.join(config['locations']['pkglibexecdir'], 'scripts/validate_config.py')
 
+config = update_config_layout(config)
 validate_config(config)
 update_pigx_work(config)