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INSTALL.txt

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RRSelection: A new simple and efficient software to detect selection region analysis based Variant Call Format
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RRSelection: A Llinkage disequilibrium method to detect selection region across population VCF
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1) Introduction
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-----------------------------------------------------------------------------------------------------------------
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#################################################################################################################
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This software relies on the zlib library packages [zlib]
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----------------------- zlib infomation ----------------------
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if Lib [zlib] do not work
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you can download form this website and install it
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http://www.zlib.net/
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2) INSTALL Method1
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----------------------------------------------------------------------------------------------------------------
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################################################################################################################
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Just execute as follows :
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git clone https://github.com/BGI-shenzhen/RRSelection.git
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chmod 755 configure ; ./configure ;
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make;
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mv RRSelection bin/ ;
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**Note:** If fail to link,try to <b>re-install</b> the libraries [**_zlib_**](https://zlib.net/)
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3) INSTALL Method2
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----------------------------------------------------------------------------------------------------------------
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################################################################################################################
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A) Method2 For linux/Unix
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For linux/Unix , execute as follows :
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tar -zxvf RRSelectionXXX.tar.gz
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cd RRSelectionXXX;
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cd src;
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make ; make clean
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../bin/RRSelection
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#I had compiled and installed these gz library packages [zlib] on the linux X64 platform
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if Link do not work ,try Re-install the gz library and copy them to the library Dir
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RRSelectionXX/src/include/zlib
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B) Method2 For macOS platform INSTALL
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you should must pre-install the library [zlib] and copy them to the corresponding library directory
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#step1 :Should must <b>re-install</b> the gz library [zlib]
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see [zlib] website
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#step2 : # Copy these gz library file into the corresponding library directory
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cp libz.a libz.so* RRSelectionXX/src/include/zlib
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#step3 :
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sh make.sh # or [make && make clean]
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C) Other Method
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Note if it can't work . follow below B1-B6 or use the static Compiled [RRSelection_static ]
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############################################
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#autoscan ./
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#cp configure.scan configure.ac
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# if can't work, follow below 6 commands
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B1: aclocal #// src/automake-1.9/aclocal
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B2: autoconf #// src/automake-1.9/autoconf
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B3: autoheader #// src/automake-1.9/autoheader
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B4: automake --add-missing #// src/automake-1.9/automake --add-missing
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B5: ./configure
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B6: make
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#############################################
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#swimming in the sky & flying in the sea#
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4) Contact
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----------------------------------------------------------------------------------------------------------------
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################################################################################################################
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join the QQ Group : 125293663
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######################swimming in the sky and flying in the sea ########################### ##
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