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dual_ref.fasta
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>B.AU.04.PS1038_Day174.DQ676871
ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAAAATTAGATAAATGGGA
AAAAATTCGGTTAAGACCAGGGGGAAAGAAACGCTATAAATTAAAACATT
TAGTATGGGCAAGCAGGGAGCTAGAAAGATTCGCAGTTAATCCTGGCCTG
TTAGAAACAGCAGAGGGCTGTAGACAAATACTGGGACAGCTACAGCCATC
CCTCCAGACAGGATCAGAAGAACTTAAATCATTATATAATACAATAGCAG
TCCTCTATTGTGTACATCAAGAGATAGAGGTAAAAGACACCAAGGAAGCT
CTAGACAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAGCA
AGCAGCAGCTGGCACAGGAAACAGTAGCCAGRCCAGCCAAAATTACCCTA
TAGTGCAAAACCTTCAGGGGCAAATGGTACATCAGGCTATCTCACCTAGA
ACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGA
AGTAATACCCATGTTYTCAGCATTAGCAGAAGGAGCCACCCCACAAGATT
TAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATG
TTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCC
AGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAA
GTGACATAGCAGGAACAACTAGTACCCTTCAGGAACAGATAGGATGGATG
ACAAATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAAT
CCTGGGATTGAATAAAATAGTAAGAATGTATAGTCCTGTCAGCATTYTGG
ATATAAGACAAGGACCAAAGGAACCCTTYAGAGACTATGTAGACCGGTTC
TATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGATGTAAAAAATTGGAT
GACAGAAACCTTGTTGGTCCAAAATGCAAACCCAGATTGTAAGACTATYT
TAAAAGCATTGGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGT
CAGGGAGTGGGGGGACCCGGCCATAAAGCAAGGGTTTTGGCTGAAGCAAT
GRRCCAAGTAACAARTYCAGCTRCCATAATGATGCAGAGAGGCMATTTTA
GGAACCAGAAAAAGACTATTAAGTGTTTCAATTGTGGCAAAGAAGGGCAC
CTAGCCAGAAATTGCAGGGCCCCTAGAAAAAAGGGCTGTTGGAAATGTGG
AAAGGAAGGACACCAAATGAAAGATTGTACTGAGAGACAGGCTAATTTTT
TAGGGAAAATCTGGCCTTCCTACAAGGCAAGGCCAGGGAATTTTCTTCAG
AGCAGACCAGAGCCRACAGCCCCACCAGCAGAGAGCTTCAGCTTTGGGGA
RGAGAAAACAACTCCCCCTCAGAAGCAGGAGCCGATAGACAAGGAGATGT
ATCCTTTAACTGCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCTCAA
TAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGAT
GATACAGTATTAGAAGAAATRAATTTGSCAGGAAAATGGAAACCAAAAAT
GATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAAATAT
CTATAGAAATYTGTGGACATAAAGTCACAGGTACAGTRTTAATAGGACCT
ACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGCTTGGWTGCAC
TTTAAATTTTCCCATTAGTCCTATTGAGACTGTACCAGTAAAATTGAAAC
CAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAA
ATAAAAGCATTAGTAGAAATTTGTACAGAGATGGAAAAGGAAGGGAAAAT
TTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAA
AGAAAAARGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGGGAGCTT
AATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCC
MGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATG
CATATTTTTCAGTTCCCTTAGATAAAGAATTCAGGAAGTATACTGCATTT
ACYATACCTAGTACAAACAATGAGACACCAGGGATTAGATATCAGTACAA
TGTGCTTCCACARGGATGGAAAGGGTCACCAGCAATATTCCAAAGTAGCA
TGACAAAGATCTTAGAGCCTTTTAGAAAACAAAATCCAGAAATAGTTATT
TATCAATACATGGATGATTTRTATGTAGGATCTGACTTAGAAATAGGACA
GCATAGAACAAAAATAGAGGAACTGAGACAACATCTGTTGAGGTGGGGAT
TAACCACACCAGACAAAAAACACCAGAAAGAACCTCCATTCCTTTGGATG
GGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCC
AGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAAT
TGAATTGGGCAAGTCAGATTTATGCAGGGATTAAARTAAAGCAATTATGT
AAACTTCTTAGGGGAACCAAAGCACTAACAGAAGTAATACCACTAACAGA
AGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAG
TACATGGAGTGTATTACGACCCATCAAAAGACTTAATAGCAGAAATACAG
AAGCAGGGACAAGGCCAATGGACTTATCAAATTTATCAAGAGCCATTTAA
AAATCTAAAAACAGGAAAGTATGCAAGAATGAGGGGTACCCACACTAATG
ATGTAAAGCAATTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGCATA
ATAATATGGGGAAAGACTCCTAAATTTAGACTRCCCATACAAAAAGAAAC
ATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGT
GGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAG
AAAGACCCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGAGCAGCYAA
TAGRGAAACTARGTTAGGAAAAGCAGGRTATGTTACTRAYAAAGGAAGRC
AAAAAGTTGTCACCCTAACTGACACAACAAATCAGAAGACTGAATTACAA
GCAATTCATCTAGCTTTACAGGATTCAGGATCAGAAGTAAACATAGTAAC
AGACTCACAATATGCATTAGGAATCMTTCAAGCACAACCAGATAAGAGTG
AATCAGAGTTAGTCAGTCAAATAATAGAGCAATTAATAAAAAAGGAAAAA
GTATACCTAGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACA
AGTAGATAAATTAGTCAGTGCTGGAATYAGAAAAGTACTATTTTTAGATG
GAATAGATAAGGCCCAAGAAGACCATGAGAGATATCACAGTAATTGGAGA
ACAATGGCTAGTGATTTTAACCTGCCACCGGTAGTAGCAAAAGAAATAGT
AGCCAGCTGTGATAAATGTCAGGTAAAAGGAGAAGCCATACATGGACAAG
TAGACTGTAGTCCAGGAATATGGCAACTAGAYTGTACACATTTAGAAGGC
AAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGA
AGTTATTCCARCAGAGACAGGGCAGGAAACAGCATACTTTATCTTAAAGT
TAGCAGGAAGATGGCCAGTAAAAACMATACATACAGACAATGGCAGCAAT
TTCACCAGTACYRCGGTTAAGGCCGCCTGTTGGTGGGCGGGGGTCAAGCA
GGAATTCGGCATTCCCTACAATCCCCAAAGCCAAGGAGTAGTAGAATCTA
TGAATAAAGAATTAAAAAAGATTATAGGACAAGTAAGAGATCAGGCTGAA
CATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAG
AAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAA
TAGCAACAGACATACAAACCAAAGAATTACAAAAACAAATTACAAAAGTT
CAAAATTTTCGGGTTTATTACAGRGACAACAGAGATCCACTTTGGAAAGG
ACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATA
ATAGTGAAATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGAT
TATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTRGACAGGATGA
GGATTAGAACATGGAAAAGTTTAGTAAAACACCATATGTATRYTTCAAGG
AAAGCTAAAGGATGGTTCTACAGACATCACTATGAAAGCCCTCATCCAAG
AGTAAGTTCAGAAGTACACATCCCACTAGGGGATGATGCTAAATTGGTAG
TAAAAACATAYTGGGGTCTGCATACAGGAGAAAGAGAATGGCATTTGGGT
CAGGGAGTCTCCATAGAATGGAGGAAAAAGAGATATAGCACACAAGTAGA
CCCTAACMTAGCAGACCAACTAATTCATCTGTATTATTTTGATTGTTTTT
CAGAATCTGCTATAAGAAATACCATATTAGGACGTATAGTTAGTCCYATT
TGTGAATATCAAGCAGGGCATAACAAGGTAGGATCTCTACAATACTTGGC
ACTAACAGCATTAATAACACCAAAARGGACAAAGCCACCTTTGCCTAGTR
TTRCGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGATCAAGGGC
CACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAGAAGAGCTT
AAGAGTGAAGCTGTTAGACATTTTCCTAGGCCATGGCTTCATAGCTTAGG
ACAATACATCTATGAAACTTATGGGGATACTTGGACAGGAGTGGAAGCCA
TAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGTGT
CGACATAGCAGAATAGGCATTATTCAACTGAGGAGAGCAAGAAATGGAGC
CAGTAGATCCTAGCCTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAAG
ACTGCTTGTACCAATTGCTATTGTAAAAGATGTTGCTTTCATTGCCAAGT
CTGTTTYACAAAAAAAGCCTTAGGCATTTCCTATGGCAGGAAGAAGCGGA
GACAGCGACGAAGAGCTCCTCAAGACAGTGAGACTCRTCAAGCTTCTTTA
TCAAAGCAGTRAGTAGTAAATGTAATGCAATCCTTAAMTATATTAGCAAT
AGTAGGATTAGTAGTAGCAGGAATACTAGCAATAGTTGTGTGGACCATAG
TAGSCATAGAATATAGGAAAATATTAAGACAAAGAAAAATAGACAGGTTA
ATTGATAGAATAAGWGAAAGAGCAGAAGATAGTGGAAATGAGAGYGAAGG
GGATCARGAAGAATTATCAGCACTGGTGGAGAGGGGGCACCTTGCTCCTA
TGGATATTRATGATTTGTAGTGCTGCAGATCAATTGTGGGTCACAGTCTA
TTATGGGGTACCTGTGTGGAARGAAGCAACCACCACTCTATTTTGTGCAT
CAGATGCTAAAGCATATGAYACAGAGGCACACAATGTTTGGGCCACACAT
GCTTGTGTGCCCACAGACCCCAACCCACAAGAAGTARCATTACCAAATGT
GACAGAATATTTTAACATGTGGAAAAATAATATGGTAGAACAGATGCAAG
AAGATGTAATCAGTCTATGGGATCAAAGCTTAAAGCCATGTGTACRATTA
ACTCCACTMTGTGTTACTTTARACTGCACTAATGCCAATATTAGYAGTAA
TGCTACTATGACCAATACTARTATTAGTGGGGAAATAGATAAAGGAGAAA
TAAAAAACTGTTCTTTCAATATCACCACAAGCATAAGAGATAAGTATCAG
AAAGAATTTGCACTTTTTTATAAACTTGATATAGCACCAATAAATGRTGA
TAATACTAGTTATAGGTTGATAAGTTGTAATACCTCAGTCATTACACAGG
CCTGTCCAAAGATATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCG
GCTGGATTTGCGATTTTAAAATGTAAGGATAAAAAGTTCAATGGAACAGG
ACTATGTAGAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAG
TAGTAACAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAAGAGGTG
GTAATTAGATCTGCCAATTTCTCGAACAATGCTAAAACCATAATAGTACA
GCTAAATGAATCTATAACAATGACTTGTGTGAGACCCCACAACAATACAA
GGAAAAGTATACRCATAGGACCAGGGAGAGCATGGTATGCAACAGGAGAR
ATAATAGGRRATATAAGACAAGTACATTGTAATCTGAGTAGAGCAAACTG
GACTGCCACTTTAAAAAGGGTAGCTATAAAATTAAGAGAACAATTTGGGA
ATAAAACAATAGTCTTTAGTCACTCCTCAGGAGGGGACCCAGAAATTGTA
ATGCACAGTCTCAATTGTGGAGGGGAATTCTTCTACTGTAATACAACACG
ACTRTTTAATAGTACTTGGGGGTTTAATAGTACTTCAAATRATACTGAAG
AATCAAATGGAACTATCACACTCCCATGCAGAATAAAACAGATTATAAAC
ATGTGGCAGAAGGTAGGAAAAGCAATGTATGCCCCTCCCATCAGAGGACA
AATTAARTGCTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTG
GTARCRAGAATAAGACCAATGACACCGAGACCTTYAGACCTGGAGGAGGA
GATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAA
AATTGAACCATTAGGAGTAGCACCCACCAGGGCAAAGAGAAGAGTGGTGC
AGAGAGAAAAAAGAGCAGTGGGAACGATAGGAGCTATGTTCCTTGGATTC
TTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAGTGACGCTGACGGT
ACAGGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAGAACAATTTGC
TGAGAGCTATTGAGGCGCAACAGCATCTGTTTCAACTCACAGTCTGGGGC
ATTAAGCAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATATCTAAAGGA
TCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATCTGCACCA
CTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAAWCCCAGRAAGAGATT
TGGGAAAACATGACCTGGATGCARTGGGAAAGAGAAATTGACAATTACAC
AGAAGTAATATACACCTTACTTGAGAMATCGCAGATCCAACAAGAAAAGA
ATGAACAAGACTTATTRGAATTAGATMAGTGGGCAAGTTTGTGGAATTGG
TTTAGCATAACAAACTGGCTGTGGTATATAAAAATATTCATAATGATAGT
AGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTGCTTTCTATAGTAA
ACAGAGTTAGGCAGGGGTACTCACCATTRTCRTTGCAGACCCACCTCCCA
GYCAGGAGGGGACYCGACAGGCCCGAAGGAATCGAAGAAGAAGGTGGAGA
CAACGACAGAGACAGATCCACTCTATTAGCGGGTGGATTCTTGGKACTTW
TCTGGGACGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGA
GACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACTCAGGGG
GTGGGAACTYCTCAAGTATTGGTGGARTCTCCTRCRRTATTGGAGTCAGG
AACTGAGGAATAGTGCKRTTAGCTTGTWCAACGCCATAGCTATAGCAGTA
GCTGAGGGGACAGATRGGRTTATAGAAGCAGTACAAAGAGCTTTYAGAAG
AATAAGACAGGGCTTGGAAAGGCTTTKGCTRTAGRATGGGTGGCAAGTGG
TCAAAAAGMAGTRGGGTTGRATGGCCTGCTGTAAGGGAAAGRATGCRACG
AGCTGAGCCAGCAGCAGATGGGGTGGGACCAGTATCGCGAGAYCTGGAAC
GACATGGAGCAATCACAAGTAGCAATACAGCAGCTACTAATGCTGATTGT
GCCTGGCTAGAAGCACAAGAGGAKGAGGARGTGGGGTTTCCAGTCAGACC
TCAGGTCCCCTTAAGACCAATGACTTTCAAGGGAGCTCTAGATCTTAGCC
ATTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTTACTCAGAAAGA
AGAAAAGAGATCCTGGATCTGTGGATGTACCACACACAAGGCTATTTCCC
TGATTGGCAGAACTACACACCAGGGCCAGGGGAGAGATATCCACTGTGCT
TTGGATGGTGCTTCAAGCTAGTACCAGTTGATCAAGAGCAGGTAGAAAAG
GCCAATGAAGGAGAGAACAACTGCTTGTTACACCCTATGAGCCAGCATGG
GATGGATGACCCGGAGAAGGAAGTGTTAATGTGGAAGTTTGACAGCCGCC
TAGCATTTCATCACATGGCCCGAGAGAAACATCCGGAGTACTTCAAGGAC
TGC