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Statiscial analysys and machine learning on the mnist dataset, for the pattern recognition course:

Algorithm R Package Function(s)
(regularized) Multinomial Logit nnet,glmnet multinom, glmnet, cv.glmnet
Support Vector Machine e1071 svm
Neural Networks nnet nnet
Parameter Tuning e1071 tune.svm, tune.nnet

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Course page: http://www.cs.uu.nl/docs/vakken/mpr/computer-labR.php