diff --git a/.gitignore b/.gitignore index 7ba7513..c9103e5 100644 --- a/.gitignore +++ b/.gitignore @@ -78,4 +78,5 @@ hg19/ GRCh37/ GRCh38/ docker/run_paa_docker.sh -*.sif \ No newline at end of file +*.sif +=* \ No newline at end of file diff --git a/conda-recipe/build.sh b/conda-recipe/build.sh index 1b8ad22..cf34795 100644 --- a/conda-recipe/build.sh +++ b/conda-recipe/build.sh @@ -15,6 +15,7 @@ mkdir -p $PREFIX/bin # setup.py will handle this in the next release cp AmpliconSuite-pipeline.py ${PREFIX}/bin/AmpliconSuite-pipeline.py cp GroupedAnalysisAmpSuite.py ${PREFIX}/bin/GroupedAnalysisAmpSuite.py +cp amplicon_classifier.py ${PREFIX}/bin/amplicon_classifier.py cp feature_similarity.py ${PREFIX}/bin/feature_similarity.py cp make_results_table.py ${PREFIX}/bin/make_results_table.py diff --git a/conda-recipe/meta.yaml b/conda-recipe/meta.yaml index 36ab4c2..d2fe694 100644 --- a/conda-recipe/meta.yaml +++ b/conda-recipe/meta.yaml @@ -17,7 +17,6 @@ source: folder: ampliconarchitectlib - url: https://github.com/AmpliconSuite/AmpliconClassifier/archive/v{{ AC_version }}.tar.gz sha256: d1f35e17827947f657892b08c93c9694e9b33947e30d45e8e515084a5c96638d - folder: ampliconclassifierlib build: noarch: python diff --git a/test_outputs/GBM39_FF-8.tar.gz b/test_outputs/GBM39_FF-8.tar.gz new file mode 100644 index 0000000..90c8977 Binary files /dev/null and b/test_outputs/GBM39_FF-8.tar.gz differ