diff --git a/docker/run_paa_script.sh b/docker/run_paa_script.sh index 397b136..894abca 100755 --- a/docker/run_paa_script.sh +++ b/docker/run_paa_script.sh @@ -27,7 +27,7 @@ echo "###############################" echo "RUNNING DOCKER STAGE..." echo "${RUN_COMMAND}" -python programs/AmpliconSuite-pipeline-master/AmpliconSuite-pipeline.py $argstring &> /home/output/PAA_stdout.log +python /home/programs/AmpliconSuite-pipeline-master/AmpliconSuite-pipeline.py $argstring &> /home/output/PAA_stdout.log echo "###############################" echo "FINISHED DOCKER STAGE"