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CPPTRAJ: Trajectory Analysis. V4.30.0 (GitHub)
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| Date/time: 10/11/20 22:11:19
| Available memory: 3.272 GB
INPUT: Reading input from 'c.in'
[parm tz2.parm7]
Reading 'tz2.parm7' as Amber Topology
This Amber topology does not include atomic numbers.
Assigning elements from atom masses/names.
No SCEE section: setting Amber default (1.2)
No SCNB section: setting Amber default (2.0)
[trajin tz2.nc]
Reading 'tz2.nc' as Amber NetCDF
[rms myrms @CA]
RMSD: (@CA), reference is first frame (@CA).
Best-fit RMSD will be calculated, coords will be rotated and translated.
[radgyr myrms @CA nomax]
Warning: DataSet 'myrms' already present.
Error: Could not initialize action [radgyr]
1 errors encountered reading input.
TIME: Total execution time: 0.0671 seconds.
Error: Error(s) occurred during execution.
What's the reason of Error: Could not initialize action [radgyr]. Is that because of Warning: DataSet 'myrms' already present.. If yes, should the Warning should be Error?
The text was updated successfully, but these errors were encountered:
What's the reason of Error: Could not initialize action [radgyr]. Is that because of Warning: DataSet 'myrms' already present.
Yes, you can't give 2 data sets the same name.
If yes, should the Warning should be Error?
Probably. I forget originally why I made it a warning. I think I had some half-baked idea to have cpptraj automatically append a number to the set so the calculation could continue, but ultimately decided that violated the principle of least surprise and wasn't worth it. I'll try to fix that this week.
drroe
changed the title
Error: Could not initialize action [radgyr]
Change "DataSet already present" message from Warning to Error
Oct 12, 2020
Hi, while working on Amber-MD/pytraj#1553, I've realized that
cpptraj
message is not very clear to me.Here is the message:
What's the reason of
Error: Could not initialize action [radgyr]
. Is that because ofWarning: DataSet 'myrms' already present.
. If yes, should theWarning
should beError
?The text was updated successfully, but these errors were encountered: