From 9c0116ec038004af899121f61d05a544830725ae Mon Sep 17 00:00:00 2001
From: YuviPanda <yuvipanda@gmail.com>
Date: Mon, 25 Nov 2024 23:01:28 -0800
Subject: [PATCH 1/2] Switch to using `csc evaluate`

Matches what is shown in the README
---
 helm-charts/app/common.values.yaml | 13 ++++++++-----
 1 file changed, 8 insertions(+), 5 deletions(-)

diff --git a/helm-charts/app/common.values.yaml b/helm-charts/app/common.values.yaml
index 416cac1..ca983b2 100644
--- a/helm-charts/app/common.values.yaml
+++ b/helm-charts/app/common.values.yaml
@@ -41,11 +41,14 @@ frx-challenges:
       # Image is built from https://github.com/janelia-cellmap/cellmap-segmentation-challenge
       EVALUATOR_DOCKER_IMAGE: quay.io/2i2c/cellmap-segmentation-challenge-evaluator:797a892d742d
       EVALUATOR_DOCKER_CMD:
-        - python
-        - -m
-        - cellmap_segmentation_challenge.evaluate
-        - --truth-path
-        - /opt/gt.zarr
+        - 'csc'
+        - 'evaluate'
+        - '--truth_path'
+        - '/opt/gt.zarr'
+        - '--submission_path'
+        - '{submission_path}'
+        - '--result_file'
+        - '{result_path}'
       EVALUATOR_DOCKER_EXTRA_BINDS:
         - /opt/state/truth/gt.zarr:/opt/gt.zarr:ro
       EVALUATOR_DOCKER_CONTAINER_CPU_LIMIT: 1.5

From b1afe765ec82ff22fe4f2da620693d7ffd67fb13 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Tue, 26 Nov 2024 07:02:16 +0000
Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 helm-charts/app/common.values.yaml | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/helm-charts/app/common.values.yaml b/helm-charts/app/common.values.yaml
index ca983b2..9bdc0fe 100644
--- a/helm-charts/app/common.values.yaml
+++ b/helm-charts/app/common.values.yaml
@@ -41,14 +41,14 @@ frx-challenges:
       # Image is built from https://github.com/janelia-cellmap/cellmap-segmentation-challenge
       EVALUATOR_DOCKER_IMAGE: quay.io/2i2c/cellmap-segmentation-challenge-evaluator:797a892d742d
       EVALUATOR_DOCKER_CMD:
-        - 'csc'
-        - 'evaluate'
-        - '--truth_path'
-        - '/opt/gt.zarr'
-        - '--submission_path'
-        - '{submission_path}'
-        - '--result_file'
-        - '{result_path}'
+        - "csc"
+        - "evaluate"
+        - "--truth_path"
+        - "/opt/gt.zarr"
+        - "--submission_path"
+        - "{submission_path}"
+        - "--result_file"
+        - "{result_path}"
       EVALUATOR_DOCKER_EXTRA_BINDS:
         - /opt/state/truth/gt.zarr:/opt/gt.zarr:ro
       EVALUATOR_DOCKER_CONTAINER_CPU_LIMIT: 1.5